MPAS7
Last updated
Last updated
spack:
specs:
- netcdf-c @4.4.1.1
- netcdf-fortran @4.4.4
- parallel-netcdf @1.8.1
- parallelio
view: truedirs=( "openmpi" "netcdf" "pio2" "all")
for d in ${dirs[@]}
do
if [ ! -d $d ]
then
mkdir $d
echo "non dir named $d and then mkdir $d"
else
echo "found dir $d"
fi
done
type_of_compiler=gcc #[gcc, intel]
path_of_spack=$(ls -d /home/$USER/Software/spack/opt/spack/$(spack arch)/$type_of_compiler*)
if [[ -e $path_of_spack ]]
then
echo "found $path_of_spack"
else
echo "No such file or dir:$path_of_spack"
exit 1
fi
path_of_openmpi=$(ls -d $path_of_spack/openmpi*/)
path_of_netcdf_c=$(ls -d $path_of_spack/netcdf-c*)
path_of_netcdf_f=$(ls -d $path_of_spack/netcdf-f*)
path_of_netcdf_para=$(ls -d $path_of_spack/parallel-netcdf*)
path_of_pio2=$(ls -d $path_of_spack/parallelio*)
# dirs=( $path_of_mpich $path_of_hdf5 $path_of_zlib $path_of_netcdf_c $path_of_netcdf_f )
dirs=( $path_of_openmpi $path_of_netcdf_c $path_of_netcdf_f $path_of_netcdf_para $path_of_pio2 )
for d in ${dirs[@]}
do
if [[ -e $d ]]
then
echo "found $d"
else
echo "No such file or dir:$d"
exit 1
fi
done
rm -rf openmpi/*
cp -r $path_of_openmpi/* openmpi/
rm -rf netcdf/*
cp -r $path_of_netcdf_c/* netcdf/
cp -r $path_of_netcdf_f/* netcdf/
cp -r $path_of_netcdf_para/* netcdf/
rm -rf pio2/*
cp -r $path_of_pio2/* pio2/
rm -rf all/*
cp -r openmpi/* all/
cp -r netcdf/* all/
cp -r pio2/* all/DIR=/home/$USER/MPAS7/libs
export NETCDF=$DIR/netcdf
export PNETCDF=$DIR/netcdf
export PIO=$DIR/pio2
export CORE=atmosphere
export USE_PIO2=true